STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R1E700_EMIHUMethionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). (272 aa)    
Predicted Functional Partners:
R1BP93_EMIHU
Uncharacterized protein.
  
 
 0.908
R1CME4_EMIHU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
   0.902
R1DVJ5_EMIHU
Uncharacterized protein.
  
 
 0.902
R1FGI1_EMIHU
Ribosomal_L23eN domain-containing protein.
  
 
 0.900
DCDS
Dihydroceramide delta(4)-desaturase.
 
      0.898
R1EGX6_EMIHU
Uncharacterized protein.
  
 
 0.835
R1D1T8_EMIHU
Ribosomal_L18_c domain-containing protein.
  
 
 0.833
R1G2L1_EMIHU
Ribosomal_L18_c domain-containing protein.
  
 
 0.833
R1D6R5_EMIHU
KH type-2 domain-containing protein.
  
 
 0.791
R1DU69_EMIHU
KH type-2 domain-containing protein.
  
 
 0.791
Your Current Organism:
Emiliania huxleyi
NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi
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