R1EC44_EMIHU protein (Emiliania huxleyi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

R1EC44_EMIHU

Uncharacterized protein. (283 aa)

Predicted Functional Partners:

R1E1Y6_EMIHU

0.544

R1FFV6_EMIHU

0.544

R1DM49_EMIHU

0.528

R1BBC7_EMIHU

0.517

R1DGC3_EMIHU

0.517

R1EG44_EMIHU

0.517

R1EGG2_EMIHU

0.517

A0A0D3JSQ3

0.484

R1F306_EMIHU

0.484

R1FP67_EMIHU

0.484

Your Current Organism:

Emiliania huxleyi

NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0D3JSQ3	R1E1Y6_EMIHU	A0A0D3JSQ3	R1E1Y6	Uncharacterized protein.	Uncharacterized protein.	0.996
A0A0D3JSQ3	R1EC44_EMIHU	A0A0D3JSQ3	R1EC44	Uncharacterized protein.	Uncharacterized protein.	0.484
A0A0D3JSQ3	R1F306_EMIHU	A0A0D3JSQ3	R1F306	Uncharacterized protein.	Non-specific lipid transfer protein.	0.883
A0A0D3JSQ3	R1FFV6_EMIHU	A0A0D3JSQ3	R1FFV6	Uncharacterized protein.	Uncharacterized protein.	0.996
A0A0D3JSQ3	R1FP67_EMIHU	A0A0D3JSQ3	R1FP67	Uncharacterized protein.	Uncharacterized protein.	0.883
R1BBC7_EMIHU	R1DM49_EMIHU	R1BBC7	R1DM49	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	0.730
R1BBC7_EMIHU	R1EC44_EMIHU	R1BBC7	R1EC44	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	Uncharacterized protein.	0.517
R1DGC3_EMIHU	R1DM49_EMIHU	R1DGC3	R1DM49	Co-chaperone GrpE, mitochondrial.	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	0.730
R1DGC3_EMIHU	R1EC44_EMIHU	R1DGC3	R1EC44	Co-chaperone GrpE, mitochondrial.	Uncharacterized protein.	0.517
R1DM49_EMIHU	R1BBC7_EMIHU	R1DM49	R1BBC7	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.730
R1DM49_EMIHU	R1DGC3_EMIHU	R1DM49	R1DGC3	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	Co-chaperone GrpE, mitochondrial.	0.730
R1DM49_EMIHU	R1EC44_EMIHU	R1DM49	R1EC44	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	Uncharacterized protein.	0.528
R1DM49_EMIHU	R1EG44_EMIHU	R1DM49	R1EG44	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.730
R1DM49_EMIHU	R1EGG2_EMIHU	R1DM49	R1EGG2	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.730
R1E1Y6_EMIHU	A0A0D3JSQ3	R1E1Y6	A0A0D3JSQ3	Uncharacterized protein.	Uncharacterized protein.	0.996
R1E1Y6_EMIHU	R1EC44_EMIHU	R1E1Y6	R1EC44	Uncharacterized protein.	Uncharacterized protein.	0.544
R1E1Y6_EMIHU	R1F306_EMIHU	R1E1Y6	R1F306	Uncharacterized protein.	Non-specific lipid transfer protein.	0.996
R1E1Y6_EMIHU	R1FFV6_EMIHU	R1E1Y6	R1FFV6	Uncharacterized protein.	Uncharacterized protein.	0.900
R1E1Y6_EMIHU	R1FP67_EMIHU	R1E1Y6	R1FP67	Uncharacterized protein.	Uncharacterized protein.	0.996
R1EC44_EMIHU	A0A0D3JSQ3	R1EC44	A0A0D3JSQ3	Uncharacterized protein.	Uncharacterized protein.	0.484