STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Roco3Miro domain-containing protein. (1191 aa)    
Predicted Functional Partners:
R1BE67_EMIHU
Small nuclear ribonucleoprotein Sm D3.
    
 0.621
R1DZW9_EMIHU
Small nuclear ribonucleoprotein Sm D2.
    
 0.606
R1EMN3_EMIHU
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.604
R1D4P7_EMIHU
Sm domain-containing protein.
    
 0.598
R1G392_EMIHU
Uncharacterized protein.
    
 0.590
R1BVC1_EMIHU
RRM domain-containing protein.
    
 0.572
R1D6C0_EMIHU
Uncharacterized protein.
   
 0.572
R1FX62_EMIHU
Uncharacterized protein.
    
 0.572
R1G0H8_EMIHU
Uncharacterized protein.
    
 0.519
R1DGH1_EMIHU
Uncharacterized protein.
    
 0.515
Your Current Organism:
Emiliania huxleyi
NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.