R1EKZ4_EMIHU protein (Emiliania huxleyi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

R1EKZ4_EMIHU

Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. (119 aa)

Predicted Functional Partners:

R1CUL5_EMIHU

0.993

R1CPI2_EMIHU

0.991

R1EN77_EMIHU

0.989

R1DGE8_EMIHU

0.984

R1D1X4_EMIHU

0.983

R1EY61_EMIHU

0.983

R1G5N2_EMIHU

0.983

R1BMU9_EMIHU

0.982

R1C1L7_EMIHU

0.979

R1DJ68_EMIHU

0.979

Your Current Organism:

Emiliania huxleyi

NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R1BMU9_EMIHU	R1CPI2_EMIHU	R1BMU9	R1CPI2	NADH dehydrogenase iron-sulfur protein 4.	NADH-ubiquinone oxidoreductase alpha subcomplex, 13.	0.999
R1BMU9_EMIHU	R1CUL5_EMIHU	R1BMU9	R1CUL5	NADH dehydrogenase iron-sulfur protein 4.	NADH ubiquinone oxidoreductase B22-like subunit; Belongs to the complex I LYR family.	0.999
R1BMU9_EMIHU	R1D1X4_EMIHU	R1BMU9	R1D1X4	NADH dehydrogenase iron-sulfur protein 4.	NADH dehydrogenase 1 alpha subcomplex.	0.999
R1BMU9_EMIHU	R1DGE8_EMIHU	R1BMU9	R1DGE8	NADH dehydrogenase iron-sulfur protein 4.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.999
R1BMU9_EMIHU	R1DJ68_EMIHU	R1BMU9	R1DJ68	NADH dehydrogenase iron-sulfur protein 4.	NADH dehydrogenase.	0.999
R1BMU9_EMIHU	R1EKZ4_EMIHU	R1BMU9	R1EKZ4	NADH dehydrogenase iron-sulfur protein 4.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.982
R1BMU9_EMIHU	R1EN77_EMIHU	R1BMU9	R1EN77	NADH dehydrogenase iron-sulfur protein 4.	NADH dehydrogenase iron-sulfur protein 3, mitochodrial; Belongs to the complex I 30 kDa subunit family.	0.999
R1BMU9_EMIHU	R1EY61_EMIHU	R1BMU9	R1EY61	NADH dehydrogenase iron-sulfur protein 4.	Uncharacterized protein.	0.999
R1BMU9_EMIHU	R1G5N2_EMIHU	R1BMU9	R1G5N2	NADH dehydrogenase iron-sulfur protein 4.	NADH-ubiquinone oxidoreductase B18 subunit.	0.998
R1C1L7_EMIHU	R1EKZ4_EMIHU	R1C1L7	R1EKZ4	Uncharacterized protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.979
R1CPI2_EMIHU	R1BMU9_EMIHU	R1CPI2	R1BMU9	NADH-ubiquinone oxidoreductase alpha subcomplex, 13.	NADH dehydrogenase iron-sulfur protein 4.	0.999
R1CPI2_EMIHU	R1CUL5_EMIHU	R1CPI2	R1CUL5	NADH-ubiquinone oxidoreductase alpha subcomplex, 13.	NADH ubiquinone oxidoreductase B22-like subunit; Belongs to the complex I LYR family.	0.999
R1CPI2_EMIHU	R1D1X4_EMIHU	R1CPI2	R1D1X4	NADH-ubiquinone oxidoreductase alpha subcomplex, 13.	NADH dehydrogenase 1 alpha subcomplex.	0.999
R1CPI2_EMIHU	R1DGE8_EMIHU	R1CPI2	R1DGE8	NADH-ubiquinone oxidoreductase alpha subcomplex, 13.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.999
R1CPI2_EMIHU	R1DJ68_EMIHU	R1CPI2	R1DJ68	NADH-ubiquinone oxidoreductase alpha subcomplex, 13.	NADH dehydrogenase.	0.999
R1CPI2_EMIHU	R1EKZ4_EMIHU	R1CPI2	R1EKZ4	NADH-ubiquinone oxidoreductase alpha subcomplex, 13.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.991
R1CPI2_EMIHU	R1EN77_EMIHU	R1CPI2	R1EN77	NADH-ubiquinone oxidoreductase alpha subcomplex, 13.	NADH dehydrogenase iron-sulfur protein 3, mitochodrial; Belongs to the complex I 30 kDa subunit family.	0.999
R1CPI2_EMIHU	R1EY61_EMIHU	R1CPI2	R1EY61	NADH-ubiquinone oxidoreductase alpha subcomplex, 13.	Uncharacterized protein.	0.999
R1CPI2_EMIHU	R1G5N2_EMIHU	R1CPI2	R1G5N2	NADH-ubiquinone oxidoreductase alpha subcomplex, 13.	NADH-ubiquinone oxidoreductase B18 subunit.	0.999
R1CUL5_EMIHU	R1BMU9_EMIHU	R1CUL5	R1BMU9	NADH ubiquinone oxidoreductase B22-like subunit; Belongs to the complex I LYR family.	NADH dehydrogenase iron-sulfur protein 4.	0.999