R1ERP9_EMIHU protein (Emiliania huxleyi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

R1ERP9_EMIHU

J domain-containing protein. (176 aa)

Predicted Functional Partners:

R1CUC6_EMIHU

0.997

R1CQM7_EMIHU

0.995

R1DQG3_EMIHU

0.964

R1G0L9_EMIHU

0.954

R1BNT5_EMIHU

0.809

R1DFK3_EMIHU

0.809

R1DMD9_EMIHU

0.809

R1DSW3_EMIHU

0.809

R1DY20_EMIHU

0.809

R1F8P6_EMIHU

0.809

Your Current Organism:

Emiliania huxleyi

NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R1BNT5_EMIHU	R1CUC6_EMIHU	R1BNT5	R1CUC6	Heat shock protein Hsp70; Belongs to the heat shock protein 70 family.	Plug_translocon domain-containing protein.	0.608
R1BNT5_EMIHU	R1ERP9_EMIHU	R1BNT5	R1ERP9	Heat shock protein Hsp70; Belongs to the heat shock protein 70 family.	J domain-containing protein.	0.809
R1CQM7_EMIHU	R1CUC6_EMIHU	R1CQM7	R1CUC6	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	Plug_translocon domain-containing protein.	0.999
R1CQM7_EMIHU	R1DQG3_EMIHU	R1CQM7	R1DQG3	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	Uncharacterized protein.	0.999
R1CQM7_EMIHU	R1ERP9_EMIHU	R1CQM7	R1ERP9	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	J domain-containing protein.	0.995
R1CQM7_EMIHU	R1G0L9_EMIHU	R1CQM7	R1G0L9	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	Protein kinase domain-containing protein.	0.959
R1CUC6_EMIHU	R1BNT5_EMIHU	R1CUC6	R1BNT5	Plug_translocon domain-containing protein.	Heat shock protein Hsp70; Belongs to the heat shock protein 70 family.	0.608
R1CUC6_EMIHU	R1CQM7_EMIHU	R1CUC6	R1CQM7	Plug_translocon domain-containing protein.	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	0.999
R1CUC6_EMIHU	R1DFK3_EMIHU	R1CUC6	R1DFK3	Plug_translocon domain-containing protein.	Uncharacterized protein.	0.608
R1CUC6_EMIHU	R1DMD9_EMIHU	R1CUC6	R1DMD9	Plug_translocon domain-containing protein.	Uncharacterized protein.	0.608
R1CUC6_EMIHU	R1DQG3_EMIHU	R1CUC6	R1DQG3	Plug_translocon domain-containing protein.	Uncharacterized protein.	0.996
R1CUC6_EMIHU	R1DSW3_EMIHU	R1CUC6	R1DSW3	Plug_translocon domain-containing protein.	Heat shock protein Hsp70, ER; Belongs to the heat shock protein 70 family.	0.608
R1CUC6_EMIHU	R1DY20_EMIHU	R1CUC6	R1DY20	Plug_translocon domain-containing protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.608
R1CUC6_EMIHU	R1ERP9_EMIHU	R1CUC6	R1ERP9	Plug_translocon domain-containing protein.	J domain-containing protein.	0.997
R1CUC6_EMIHU	R1F8P6_EMIHU	R1CUC6	R1F8P6	Plug_translocon domain-containing protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.608
R1CUC6_EMIHU	R1G0L9_EMIHU	R1CUC6	R1G0L9	Plug_translocon domain-containing protein.	Protein kinase domain-containing protein.	0.959
R1DFK3_EMIHU	R1CUC6_EMIHU	R1DFK3	R1CUC6	Uncharacterized protein.	Plug_translocon domain-containing protein.	0.608
R1DFK3_EMIHU	R1ERP9_EMIHU	R1DFK3	R1ERP9	Uncharacterized protein.	J domain-containing protein.	0.809
R1DMD9_EMIHU	R1CUC6_EMIHU	R1DMD9	R1CUC6	Uncharacterized protein.	Plug_translocon domain-containing protein.	0.608
R1DMD9_EMIHU	R1ERP9_EMIHU	R1DMD9	R1ERP9	Uncharacterized protein.	J domain-containing protein.	0.809