R1F8Y9_EMIHU protein (Emiliania huxleyi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

R1F8Y9_EMIHU

Uncharacterized protein. (1007 aa)

Predicted Functional Partners:

R1DPU4_EMIHU

0.925

R1E3V4_EMIHU

0.925

R1F1N3_EMIHU

0.925

R1CU23_EMIHU

0.764

A0A0D3IPP6

0.752

R1F509_EMIHU

0.752

VPS34-1

0.687

R1DEK8_EMIHU

0.687

VPS34-2

0.687

AP1S

0.685

Your Current Organism:

Emiliania huxleyi

NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0D3IPP6	R1DEK8_EMIHU	A0A0D3IPP6	R1DEK8	Protein kinase domain-containing protein.	C2 PI3K-type domain-containing protein; Belongs to the PI3/PI4-kinase family.	0.973
A0A0D3IPP6	R1F8Y9_EMIHU	A0A0D3IPP6	R1F8Y9	Protein kinase domain-containing protein.	Uncharacterized protein.	0.752
A0A0D3IPP6	VPS34-1	A0A0D3IPP6	R1D3T9	Protein kinase domain-containing protein.	Phosphatidylinositol 3-kinase Vps34; Belongs to the PI3/PI4-kinase family.	0.973
A0A0D3IPP6	VPS34-2	A0A0D3IPP6	R1EU42	Protein kinase domain-containing protein.	Phosphatidylinositol 3-kinase Vps34; Belongs to the PI3/PI4-kinase family.	0.973
AP1S	R1DPU4_EMIHU	A0A0M5K5F7	R1DPU4	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	Protein kinase domain-containing protein.	0.922
AP1S	R1E3V4_EMIHU	A0A0M5K5F7	R1E3V4	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	Protein kinase domain-containing protein.	0.922
AP1S	R1F1N3_EMIHU	A0A0M5K5F7	R1F1N3	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	Protein kinase domain-containing protein.	0.922
AP1S	R1F8Y9_EMIHU	A0A0M5K5F7	R1F8Y9	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	Uncharacterized protein.	0.685
R1CU23_EMIHU	R1F8Y9_EMIHU	R1CU23	R1F8Y9	SH3 domain-containing protein.	Uncharacterized protein.	0.764
R1DEK8_EMIHU	A0A0D3IPP6	R1DEK8	A0A0D3IPP6	C2 PI3K-type domain-containing protein; Belongs to the PI3/PI4-kinase family.	Protein kinase domain-containing protein.	0.973
R1DEK8_EMIHU	R1F509_EMIHU	R1DEK8	R1F509	C2 PI3K-type domain-containing protein; Belongs to the PI3/PI4-kinase family.	Protein kinase domain-containing protein.	0.973
R1DEK8_EMIHU	R1F8Y9_EMIHU	R1DEK8	R1F8Y9	C2 PI3K-type domain-containing protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.687
R1DPU4_EMIHU	AP1S	R1DPU4	A0A0M5K5F7	Protein kinase domain-containing protein.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.922
R1DPU4_EMIHU	R1E3V4_EMIHU	R1DPU4	R1E3V4	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.980
R1DPU4_EMIHU	R1F1N3_EMIHU	R1DPU4	R1F1N3	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.980
R1DPU4_EMIHU	R1F8Y9_EMIHU	R1DPU4	R1F8Y9	Protein kinase domain-containing protein.	Uncharacterized protein.	0.925
R1E3V4_EMIHU	AP1S	R1E3V4	A0A0M5K5F7	Protein kinase domain-containing protein.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.922
R1E3V4_EMIHU	R1DPU4_EMIHU	R1E3V4	R1DPU4	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.980
R1E3V4_EMIHU	R1F1N3_EMIHU	R1E3V4	R1F1N3	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.980
R1E3V4_EMIHU	R1F8Y9_EMIHU	R1E3V4	R1F8Y9	Protein kinase domain-containing protein.	Uncharacterized protein.	0.925