STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R1FDL4_EMIHUUncharacterized protein. (182 aa)    
Predicted Functional Partners:
R1BFZ6_EMIHU
PHD-type domain-containing protein.
     
 0.912
R1E217_EMIHU
TFIID_20kDa domain-containing protein.
   
  0.588
R1CW50_EMIHU
Uncharacterized protein.
   
 0.571
R1E9V5_EMIHU
RRM domain-containing protein.
   
 0.566
R1BLA3_EMIHU
Uncharacterized protein.
   
 0.558
R1EEX5_EMIHU
RNA-binding protein.
   
 0.555
R1FY24_EMIHU
OCRE domain-containing protein.
    
 0.548
R1EFY2_EMIHU
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
     
 0.540
R1DS78_EMIHU
TAFII55_N domain-containing protein.
    
  0.537
R1ET62_EMIHU
RRM domain-containing protein.
   
 0.537
Your Current Organism:
Emiliania huxleyi
NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi
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