Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
R1BH47_EMIHU | R1FGP4_EMIHU | R1BH47 | R1FGP4 | Ubiquitin carboxyl-terminal hydrolase. | UDP-N-acetylglucosamine. | 0.581 |
R1F7H4_EMIHU | R1FGP4_EMIHU | R1F7H4 | R1FGP4 | AB hydrolase-1 domain-containing protein. | UDP-N-acetylglucosamine. | 0.597 |
R1F7H4_EMIHU | rpl23 | R1F7H4 | Q4G363 | AB hydrolase-1 domain-containing protein. | 50S ribosomal protein L23, chloroplastic; Binds to 23S rRNA. | 0.987 |
R1FGP4_EMIHU | R1BH47_EMIHU | R1FGP4 | R1BH47 | UDP-N-acetylglucosamine. | Ubiquitin carboxyl-terminal hydrolase. | 0.581 |
R1FGP4_EMIHU | R1F7H4_EMIHU | R1FGP4 | R1F7H4 | UDP-N-acetylglucosamine. | AB hydrolase-1 domain-containing protein. | 0.597 |
R1FGP4_EMIHU | rpl23 | R1FGP4 | Q4G363 | UDP-N-acetylglucosamine. | 50S ribosomal protein L23, chloroplastic; Binds to 23S rRNA. | 0.518 |
rpl23 | R1F7H4_EMIHU | Q4G363 | R1F7H4 | 50S ribosomal protein L23, chloroplastic; Binds to 23S rRNA. | AB hydrolase-1 domain-containing protein. | 0.987 |
rpl23 | R1FGP4_EMIHU | Q4G363 | R1FGP4 | 50S ribosomal protein L23, chloroplastic; Binds to 23S rRNA. | UDP-N-acetylglucosamine. | 0.518 |