STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R1FP40_EMIHUATP-dependent metalloprotease FtsH; Belongs to the AAA ATPase family. (676 aa)    
Predicted Functional Partners:
rpl27
50S ribosomal protein L27, chloroplastic.
  
 
 0.803
rps14
30S ribosomal protein S14, chloroplastic; Binds 16S rRNA, required for the assembly of 30S particles.
   
 
 0.800
R1DUU9_EMIHU
PHB domain-containing protein.
   
 0.770
R1EJY7_EMIHU
PHB domain-containing protein.
   
 0.770
R1FPT0_EMIHU
Prohibitin.
   
 0.770
rps12
30S ribosomal protein S12, chloroplastic; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits (By similarity).
   
 
 0.764
rps16
30S ribosomal protein S16, chloroplastic.
  
 
 0.762
rps18
30S ribosomal protein S18, chloroplastic; Belongs to the bacterial ribosomal protein bS18 family.
   
   0.754
R1EXU2_EMIHU
Prohibitin.
   
 0.744
R1F6R8_EMIHU
PHB domain-containing protein.
   
 0.744
Your Current Organism:
Emiliania huxleyi
NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi
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