STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R1FP83_EMIHUUncharacterized protein. (487 aa)    
Predicted Functional Partners:
R1EWR7_EMIHU
DNA topoisomerase type I.
    
 
 0.807
R1DG63_EMIHU
Ku domain-containing protein.
     
 0.672
R1DYC8_EMIHU
Uncharacterized protein.
    
 
 0.663
R1E7Q8_EMIHU
Uncharacterized protein.
    
 
 0.663
R1E8L8_EMIHU
Uncharacterized protein.
    
 
 0.663
R1EPJ3_EMIHU
Aprataxin.
    
 
 0.663
R1D8D0_EMIHU
Putative DNA ligase.
   
 0.620
R1FRN8_EMIHU
WLM domain-containing protein.
    
 
 0.568
R1DBD4_EMIHU
Ku domain-containing protein.
    
 0.566
R1EXQ5_EMIHU
Ku domain-containing protein.
    
 0.566
Your Current Organism:
Emiliania huxleyi
NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.