Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PKS4 | R1D4R4_EMIHU | R1DT88 | R1D4R4 | Polyketide synthase. | Carrier domain-containing protein. | 0.483 |
PKS4 | R1D751_EMIHU | R1DT88 | R1D751 | Polyketide synthase. | AMP-binding domain-containing protein. | 0.417 |
PKS4 | R1FCM8_EMIHU | R1DT88 | R1FCM8 | Polyketide synthase. | AMP-binding domain-containing protein. | 0.427 |
PKS4 | R1FCN2_EMIHU | R1DT88 | R1FCN2 | Polyketide synthase. | AMP-binding domain-containing protein. | 0.426 |
PKS4 | R1FPK4_EMIHU | R1DT88 | R1FPK4 | Polyketide synthase. | AMP-binding domain-containing protein. | 0.914 |
R1D4R4_EMIHU | PKS4 | R1D4R4 | R1DT88 | Carrier domain-containing protein. | Polyketide synthase. | 0.483 |
R1D4R4_EMIHU | R1FPK4_EMIHU | R1D4R4 | R1FPK4 | Carrier domain-containing protein. | AMP-binding domain-containing protein. | 0.920 |
R1D751_EMIHU | PKS4 | R1D751 | R1DT88 | AMP-binding domain-containing protein. | Polyketide synthase. | 0.417 |
R1D751_EMIHU | R1FPK4_EMIHU | R1D751 | R1FPK4 | AMP-binding domain-containing protein. | AMP-binding domain-containing protein. | 0.927 |
R1EJC0_EMIHU | R1FI73_EMIHU | R1EJC0 | R1FI73 | Polyketide synthase. | PKS_ER domain-containing protein. | 0.606 |
R1EJC0_EMIHU | R1FPK4_EMIHU | R1EJC0 | R1FPK4 | Polyketide synthase. | AMP-binding domain-containing protein. | 0.616 |
R1F588_EMIHU | R1FPK4_EMIHU | R1F588 | R1FPK4 | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | AMP-binding domain-containing protein. | 0.623 |
R1FCM8_EMIHU | PKS4 | R1FCM8 | R1DT88 | AMP-binding domain-containing protein. | Polyketide synthase. | 0.427 |
R1FCM8_EMIHU | R1FPK4_EMIHU | R1FCM8 | R1FPK4 | AMP-binding domain-containing protein. | AMP-binding domain-containing protein. | 0.904 |
R1FCN2_EMIHU | PKS4 | R1FCN2 | R1DT88 | AMP-binding domain-containing protein. | Polyketide synthase. | 0.426 |
R1FCN2_EMIHU | R1FPK4_EMIHU | R1FCN2 | R1FPK4 | AMP-binding domain-containing protein. | AMP-binding domain-containing protein. | 0.930 |
R1FI73_EMIHU | R1EJC0_EMIHU | R1FI73 | R1EJC0 | PKS_ER domain-containing protein. | Polyketide synthase. | 0.606 |
R1FI73_EMIHU | R1FPK4_EMIHU | R1FI73 | R1FPK4 | PKS_ER domain-containing protein. | AMP-binding domain-containing protein. | 0.811 |
R1FPK4_EMIHU | PKS4 | R1FPK4 | R1DT88 | AMP-binding domain-containing protein. | Polyketide synthase. | 0.914 |
R1FPK4_EMIHU | R1D4R4_EMIHU | R1FPK4 | R1D4R4 | AMP-binding domain-containing protein. | Carrier domain-containing protein. | 0.920 |
page 1 of 2