STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R1FUZ4_EMIHUUncharacterized protein. (441 aa)    
Predicted Functional Partners:
R1FGI1_EMIHU
Ribosomal_L23eN domain-containing protein.
    
   0.636
rps18
30S ribosomal protein S18, chloroplastic; Belongs to the bacterial ribosomal protein bS18 family.
    
   0.505
rpl20
50S ribosomal protein L20, chloroplastic; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
    
 
 0.414
R1EN15_EMIHU
50S ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
    
 
 0.414
rpl27
50S ribosomal protein L27, chloroplastic.
   
   0.404
R1BCG6_EMIHU
Ribos_L4_asso_C domain-containing protein.
    
   0.404
R1DBB7_EMIHU
Uncharacterized protein.
    
   0.404
R1E4F3_EMIHU
Uncharacterized protein.
    
   0.404
R1FPB6_EMIHU
Uncharacterized protein.
    
   0.404
rpl31
50S ribosomal protein L31, chloroplastic; Binds the 23S rRNA.
    
   0.400
Your Current Organism:
Emiliania huxleyi
NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi
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