STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R1G6J7_EMIHURab-GAP TBC domain-containing protein. (316 aa)    
Predicted Functional Partners:
Rab6-2
Rab6, rab family GTPase.
    
 0.674
Rab6-1
Rab6, rab family GTPase.
    
 0.674
Rab5b-2
Rab5b, rab family GTPase.
    
 0.516
Rab5L-2
Rab family GTPase.
    
 0.516
Rab5a
Rab5a, rab family GTPase.
    
 0.516
Rab5L-1
Rab5L, rab family GTPase.
    
 0.516
Rab20
Rab20, rab family GTPase.
    
 0.516
Rab50
Rab50, rab family GTPase.
    
 0.516
A0A0D3IHL1
Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
    
 0.481
Rab1a-1
Rab family GTPase.
    
 0.481
Your Current Organism:
Emiliania huxleyi
NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.