Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABL64636.1 | ABL64639.1 | Cpha266_0580 | Cpha266_0583 | KEGG: cch:Cag_1745 hypothetical protein. | TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; KEGG: cte:CT1610 bacteriochlorophyll a synthase. | 0.416 |
ABL64636.1 | rnhA | Cpha266_0580 | Cpha266_0581 | KEGG: cch:Cag_1745 hypothetical protein. | RNase HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.769 |
ABL64636.1 | rpmB | Cpha266_0580 | Cpha266_0582 | KEGG: cch:Cag_1745 hypothetical protein. | PFAM: ribosomal protein L28; KEGG: cch:Cag_1743 ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.556 |
ABL64639.1 | ABL64636.1 | Cpha266_0583 | Cpha266_0580 | TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; KEGG: cte:CT1610 bacteriochlorophyll a synthase. | KEGG: cch:Cag_1745 hypothetical protein. | 0.416 |
ABL64639.1 | rnhA | Cpha266_0583 | Cpha266_0581 | TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; KEGG: cte:CT1610 bacteriochlorophyll a synthase. | RNase HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.424 |
ABL64639.1 | rpmB | Cpha266_0583 | Cpha266_0582 | TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; KEGG: cte:CT1610 bacteriochlorophyll a synthase. | PFAM: ribosomal protein L28; KEGG: cch:Cag_1743 ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.575 |
rnhA | ABL64636.1 | Cpha266_0581 | Cpha266_0580 | RNase HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | KEGG: cch:Cag_1745 hypothetical protein. | 0.769 |
rnhA | ABL64639.1 | Cpha266_0581 | Cpha266_0583 | RNase HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; KEGG: cte:CT1610 bacteriochlorophyll a synthase. | 0.424 |
rnhA | rpmB | Cpha266_0581 | Cpha266_0582 | RNase HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | PFAM: ribosomal protein L28; KEGG: cch:Cag_1743 ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.617 |
rpmB | ABL64636.1 | Cpha266_0582 | Cpha266_0580 | PFAM: ribosomal protein L28; KEGG: cch:Cag_1743 ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | KEGG: cch:Cag_1745 hypothetical protein. | 0.556 |
rpmB | ABL64639.1 | Cpha266_0582 | Cpha266_0583 | PFAM: ribosomal protein L28; KEGG: cch:Cag_1743 ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; KEGG: cte:CT1610 bacteriochlorophyll a synthase. | 0.575 |
rpmB | rnhA | Cpha266_0582 | Cpha266_0581 | PFAM: ribosomal protein L28; KEGG: cch:Cag_1743 ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | RNase HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.617 |