STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABL65824.1KEGG: plt:Plut_1573 hypothetical protein. (411 aa)    
Predicted Functional Partners:
ABL65825.1
PFAM: cytochrome c assembly protein; KEGG: plt:Plut_1574 cytochrome c biogenesis protein.
 
  
 0.979
ABL65134.1
KEGG: cte:CT0984 hypothetical protein.
  
     0.773
ABL64404.1
KEGG: plt:Plut_1902 hypothetical protein.
 
     0.765
ABL65557.1
KEGG: cch:Cag_0822 hypothetical protein.
  
     0.765
ABL65819.1
PFAM: amine oxidase; KEGG: cte:CT1357 hypothetical protein.
 
   
 0.738
ABL66055.1
KEGG: plt:Plut_0353 hypothetical protein.
  
     0.732
ABL64680.1
KEGG: plt:Plut_0499 hypothetical protein.
  
     0.730
ABL65693.1
KEGG: cch:Cag_1153 hypothetical protein.
  
     0.711
ABL64579.1
PFAM: Sigma-70, region 4 type 2; KEGG: plt:Plut_0585 hypothetical protein.
  
     0.710
ABL64924.1
PFAM: ferredoxin; KEGG: cte:CT0651 chlorosome envelope protein J.
  
    0.702
Your Current Organism:
Chlorobium phaeobacteroides DSM 266
NCBI taxonomy Id: 290317
Other names: C. phaeobacteroides DSM 266, Chlorobium phaeobacteroides DSMZ 266(T), Chlorobium phaeobacteroides str. DSM 266, Chlorobium phaeobacteroides strain DSM 266
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.