STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABL66014.1Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; PFAM: ribulose bisphosphate carboxylase, large chain; KEGG: plt:Plut_0412 ribulose-bisphosphate carboxylase. (438 aa)    
Predicted Functional Partners:
ABL64560.1
PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cte:CT1708 hydrolase, haloacid dehalogenase-like family.
     
 0.906
ABL65181.1
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cte:CT1236 phosphatase, putative.
     
 0.906
ABL65270.1
KEGG: plt:Plut_1252 HAD-superfamily hydrolase subfamily IA; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase.
     
 0.906
ABL66013.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cch:Cag_1639 oxidoreductase, short-chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.741
ABL65883.1
PFAM: major facilitator superfamily MFS_1; KEGG: plt:Plut_1481 transporter, putative.
  
     0.732
ABL66263.1
KEGG: cch:Cag_0249 acetyltransferase, CysE/LacA/LpxA/NodL family.
    
 
 0.717
ABL66012.1
KEGG: cte:CT1770 hypothetical protein.
       0.698
ABL64581.1
KEGG: plt:Plut_1657 hypothetical protein.
  
     0.671
ABL66261.1
PFAM: FAD dependent oxidoreductase; KEGG: cch:Cag_0248 protoporphyrinogen oxidase, putative.
  
     0.624
ABL66367.1
TIGRFAM: bacteriochlorophyll 4-vinyl reductase; KEGG: plt:Plut_0218 bacteriochlorophyll 4-vinyl reductase.
  
     0.615
Your Current Organism:
Chlorobium phaeobacteroides DSM 266
NCBI taxonomy Id: 290317
Other names: C. phaeobacteroides DSM 266, Chlorobium phaeobacteroides DSMZ 266(T), Chlorobium phaeobacteroides str. DSM 266, Chlorobium phaeobacteroides strain DSM 266
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