Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABL66016.1Short-chain dehydrogenase/reductase SDR; PFAM: class II aldolase/adducin family protein; short-chain dehydrogenase/reductase SDR; KEGG: plt:Plut_0410 short chain dehydrogenase. (705 aa)    
Predicted Functional Partners:
ABL66015.1
PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: cch:Cag_1641 hypothetical protein.
 
    0.732
ABL66017.1
KEGG: plt:Plut_0409 hypothetical protein.
       0.569
ABL66013.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cch:Cag_1639 oxidoreductase, short-chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.557
ABL64603.1
TIGRFAM: amino acid adenylation domain; PFAM: GCN5-related N-acetyltransferase; AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: ava:Ava_1613 non-ribosomal peptide synthase.
  
 
 0.514
ABL66014.1
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; PFAM: ribulose bisphosphate carboxylase, large chain; KEGG: plt:Plut_0412 ribulose-bisphosphate carboxylase.
       0.481
ABL66018.1
PFAM: 2-vinyl bacteriochlorophyllide hydratase; KEGG: cch:Cag_1644 2-vinyl bacteriochlorophyllide hydratase.
       0.478
ABL66012.1
KEGG: cte:CT1770 hypothetical protein.
       0.430
ABL65330.1
PFAM: Ankyrin; KEGG: mmu:105522 ankyrin repeat domain 28.
   
 0.417
ABL64925.1
PFAM: ferredoxin; KEGG: plt:Plut_0629 chlorosome envelope protein X.
  
 
 0.401
Your Current Organism:
Chlorobium phaeobacteroides DSM 266
NCBI taxonomy Id: 290317
Other names: C. phaeobacteroides DSM 266, Chlorobium phaeobacteroides DSMZ 266(T), Chlorobium phaeobacteroides str. DSM 266, Chlorobium phaeobacteroides strain DSM 266
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