STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cvib_0803PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: plt:Plut_1149 drug resistance protein, putative. (425 aa)    
Predicted Functional Partners:
Cvib_0802
PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: plt:Plut_1150 oxidoreductase, Gfo/Idh/MocA family.
     
 0.652
Cvib_0801
TIGRFAM: metal dependent phophohydrolase; PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase, HD sub domain; KEGG: plt:Plut_1151 polyA polymerase family protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.602
Cvib_0804
PFAM: periplasmic binding protein; KEGG: plt:Plut_1148 ABC transporter, periplasmic substrate-binding protein.
  
  
 0.601
Cvib_0800
TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; KEGG: plt:Plut_1152 adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
     
 0.516
Cvib_0799
Positive regulator of sigma(E), RseC/MucC; KEGG: plt:Plut_1153 hypothetical protein.
       0.501
Cvib_0805
PFAM: Na+/Pi-cotransporter; KEGG: plt:Plut_1146 Na/Pi cotransporter II-related.
       0.417
Your Current Organism:
Chlorobium phaeovibrioides
NCBI taxonomy Id: 290318
Other names: C. phaeovibrioides DSM 265, Chlorobium phaeovibrioides DSM 265, Chlorobium vibrioforme f. thiosulfatophilum DSM 265, Prosthecochloris vibrioformis DSM 265
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.