STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cvib_1165Cell division and transport-associated protein TolA; KEGG: plt:Plut_0613 TonB-like; TC 2.C.1.2.1. (278 aa)    
Predicted Functional Partners:
Cvib_1167
Cell division and transport-associated protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: plt:Plut_0611 ExbB/TolQ family protein; TC 2.C.1.2.1.
 
 
 0.951
Cvib_1166
Cell division and transport-associated protein TolR; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: plt:Plut_0612 ExbD/TolR family protein; TC 2.C.1.2.1.
 
 
 0.944
Cvib_1353
KEGG: plt:Plut_1540 TonB-dependent receptor, putative.
 
 
 0.924
Cvib_1164
WD-40 repeat-containing protein; PFAM: WD40 domain protein beta Propeller; KEGG: plt:Plut_0614 TolB protein, putative.
 
 
 
 0.871
Cvib_1378
Outer membrane transport energization protein ExbD; KEGG: plt:Plut_1587 hypothetical protein; TC 2.C.1.1.1.
 
 
 0.739
Cvib_0321
PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: plt:Plut_0256 ferric siderophore receptor, putative, TonB receptor family.
 
 
 0.732
Cvib_1161
TIGRFAM: Tetratricopeptide domain protein; KEGG: plt:Plut_0617 hypothetical protein.
 
   
 0.711
Cvib_1379
Outer membrane transport energization protein ExbB; PFAM: MotA/TolQ/ExbB proton channel; KEGG: plt:Plut_1588 MotA/TolQ/ExbB proton channel family protein; TC 2.C.1.1.1.
  
 
 0.695
Cvib_1168
PFAM: phosphatidate cytidylyltransferase; protein of unknown function DUF92, transmembrane; KEGG: plt:Plut_0610 membrane protein.
       0.687
Cvib_1377
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: plt:Plut_1586 hypothetical protein; TC 2.C.1.1.1.
  
 
 0.686
Your Current Organism:
Chlorobium phaeovibrioides
NCBI taxonomy Id: 290318
Other names: C. phaeovibrioides DSM 265, Chlorobium phaeovibrioides DSM 265, Chlorobium vibrioforme f. thiosulfatophilum DSM 265, Prosthecochloris vibrioformis DSM 265
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