STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Cvib_1636Succinate dehydrogenase subunit C; PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: plt:Plut_1993 succinate/fumarate oxidoreductase, putative. (282 aa)    
Predicted Functional Partners:
Cvib_1637
KEGG: plt:Plut_1994 succinate dehydrogenase/fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin.
 
 
 0.983
Cvib_1638
KEGG: plt:Plut_1995 succinate dehydrogenase or fumarate reductase, flavoprotein subunit; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
 
 0.982
Cvib_0843
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; FAD dependent oxidoreductase; KEGG: plt:Plut_1109 heterodisulfide reductase, subunit A.
 
 
 0.945
Cvib_1722
KEGG: plt:Plut_2081 succinate dehydrogenase; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein.
  
 
 0.929
Cvib_0842
PFAM: methyl-viologen-reducing hydrogenase, delta subunit; KEGG: plt:Plut_1110 hydrogenase, methyl-violgen-reducing type, delta subunit.
 
 
 0.922
Cvib_1721
Succinate dehydrogenase subunit B; PFAM: ferredoxin; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: plt:Plut_2080 succinate dehydrogenase.
  
 
 0.918
Cvib_1020
Fumarase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
  0.915
Cvib_0412
PFAM: aldehyde dehydrogenase; KEGG: plt:Plut_0352 aldehyde dehydrogenase family protein.
   
 
  0.902
sucC
succinyl-CoA synthetase (ADP-forming) beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
     
  0.900
sucD
succinyl-CoA synthetase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
     
  0.900
Your Current Organism:
Chlorobium phaeovibrioides
NCBI taxonomy Id: 290318
Other names: C. phaeovibrioides DSM 265, Chlorobium phaeovibrioides DSM 265, Chlorobium vibrioforme f. thiosulfatophilum DSM 265, Prosthecochloris vibrioformis DSM 265
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