STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00115Hypothetical protein; Psort location: Cytoplasmic, score:8.96. (103 aa)    
Predicted Functional Partners:
CKO_00114
Hypothetical protein.
       0.773
CKO_00117
Hypothetical protein; KEGG: eci:UTI89_C3860 2.0e-06 crp; CRP-cAMP transcriptional dual regulator K00924; COG: NOG28604 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
       0.773
CKO_00118
Hypothetical protein; KEGG: sty:STY3644 6.3e-107 probable uridine phosphorylase K00757; COG: COG2820 Uridine phosphorylase; Psort location: Cytoplasmic, score:8.96.
       0.594
CKO_00119
Hypothetical protein; COG: COG3201 Nicotinamide mononucleotide transporter; Psort location: CytoplasmicMembrane, score:10.00.
       0.594
CKO_00116
Hypothetical protein; KEGG: ssn:SSO_3946 2.0e-46 ppiC; peptidyl-prolyl cis-trans isomerase C K03769; COG: COG0760 Parvulin-like peptidyl-prolyl isomerase; Psort location: OuterMembrane, score:9.92.
       0.572
rep
Hypothetical protein; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction.
       0.416
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.