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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00162Hypothetical protein; COG: COG1280 Putative threonine efflux protein; Psort location: CytoplasmicMembrane, score:10.00. (206 aa)    
Predicted Functional Partners:
CKO_00165
Hypothetical protein; COG: COG1280 Putative threonine efflux protein; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.755
CKO_01442
Hypothetical protein; COG: COG1280 Putative threonine efflux protein; Psort location: CytoplasmicMembrane, score:10.00.
  
    0.720
CKO_00161
Hypothetical protein; KEGG: sec:SC3857 0. recQ; ATP-dependent DNA helicase K03654; COG: COG0514 Superfamily II DNA helicase; Psort location: Cytoplasmic, score:8.96.
       0.631
CKO_00160
Hypothetical protein; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family.
       0.484
CKO_00159
COG: COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism.
 
     0.447
CKO_00158
Hypothetical protein; COG: COG2962 Predicted permeases; Psort location: CytoplasmicMembrane, score:10.00.
 
   
 0.406
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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