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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00201Hypothetical protein; COG: COG3148 Uncharacterized conserved protein. (174 aa)    
Predicted Functional Partners:
CKO_00200
Hypothetical protein; KEGG: eci:UTI89_C2907 0. yfiQ; hypothetical protein YfiQ K09181; COG: COG1042 Acyl-CoA synthetase (NDP forming); Psort location: CytoplasmicMembrane, score:9.82.
       0.698
glpG
Hypothetical protein; Rhomboid-type serine protease that catalyzes intramembrane proteolysis.
 
     0.445
CKO_00199
Hypothetical protein; KEGG: spt:SPA0265 5.2e-238 pssA; CDP-diacylglycerol-serine O-phosphatidyltransferase K00998; COG: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; Psort location: Cytoplasmic, score:8.96.
       0.444
CKO_00592
Hypothetical protein; KEGG: eci:UTI89_C2461 0. yejH; hypothetical protein YejH K01529; COG: COG1061 DNA or RNA helicases of superfamily II; Psort location: Cytoplasmic, score:8.96.
  
     0.439
CKO_00202
Hypothetical protein; KEGG: ecp:ECP_2584 7.5e-72 thioredoxin 2 K03672; COG: COG0526 Thiol-disulfide isomerase and thioredoxins; Psort location: Cytoplasmic, score:9.97; Belongs to the thioredoxin family.
       0.435
CKO_02437
Hypothetical protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH).
  
     0.429
CKO_00198
Hypothetical protein; COG: COG5544 Predicted periplasmic lipoprotein.
 
     0.423
CKO_00659
Hypothetical protein; COG: NOG06773 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.46.
  
     0.421
CKO_02474
Hypothetical protein; COG: NOG13544 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
     0.421
CKO_00108
Hypothetical protein; KEGG: sec:SC3807 4.1e-39 ilvM; acetolactate synthase II, small subunit K01653; COG: COG3978 Acetolactate synthase (isozyme II), small (regulatory) subunit; Psort location: Cytoplasmic, score:8.96.
  
     0.420
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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