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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00231Hypothetical protein; KEGG: ecp:ECP_2558 8.9e-227 putative sensor-like histidine kinase YfhK K07711; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score:10.00. (493 aa)    
Predicted Functional Partners:
CKO_00233
Hypothetical protein; KEGG: eci:UTI89_C2502 1.5e-82 atoC; acetoacetate metabolism regulatory protein AtoC K07714; COG: COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; Psort location: Cytoplasmic, score:9.97.
 
 
 0.988
CKO_03790
Hypothetical protein; KEGG: psp:PSPPH_3276 1.4e-71 sensory box sensor histidine kinase/response regulator; COG: COG0784 FOG: CheY-like receiver; Psort location: CytoplasmicMembrane, score:10.00.
   
 
 0.944
CKO_04614
Hypothetical protein; KEGG: sec:SC3266 0. arcB; aerobic respiration control sensor protein K07648; COG: COG0784 FOG: CheY-like receiver; Psort location: CytoplasmicMembrane, score:9.97.
 
 
0.920
CKO_04605
Hypothetical protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
     
 0.904
CKO_04139
Hypothetical protein; KEGG: spt:SPA2823 0. barA; sensor protein; COG: COG0784 FOG: CheY-like receiver; Psort location: CytoplasmicMembrane, score:9.99.
  
 
0.776
CKO_04368
Hypothetical protein; KEGG: sbo:SBO_2396 2.5e-190 evgS, evgA; putative sensor for regulator EvgA K07679; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Psort location: CytoplasmicMembrane, score:9.82.
 
 
0.769
CKO_01389
Hypothetical protein; COG: COG1983 Putative stress-responsive transcriptional regulator.
  
   0.721
CKO_00232
Hypothetical protein; COG: NOG06210 non supervised orthologous group.
 
   
 0.717
CKO_03177
Hypothetical protein; COG: COG4568 Transcriptional antiterminator; Psort location: Cytoplasmic, score:8.96.
  
     0.707
CKO_02772
Hypothetical protein; KEGG: eci:UTI89_C0420 4.7e-118 phoB; positive response regulator for pho regulon K07657; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score:9.97.
 
 
 0.691
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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