Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00243Hypothetical protein; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:10.00. (379 aa)    
Predicted Functional Partners:
CKO_00241
Hypothetical protein; KEGG: eco:b3879 0.0025 yihR; predicted aldose-1-epimerase K01785; COG: COG2017 Galactose mutarotase and related enzymes.
  
  
 0.646
CKO_00240
Hypothetical protein; KEGG: cal:orf19.644 1.2e-46 HXT4; high-affinity glucose transporter or sensor K01804; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:10.00; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
       0.620
CKO_00232
Hypothetical protein; COG: NOG06210 non supervised orthologous group.
  
    0.605
CKO_00239
Hypothetical protein; KEGG: eci:UTI89_C2868 0. yphG; hypothetical protein YphG K00754; COG: NOG06209 non supervised orthologous group; Psort location: OuterMembrane, score:9.49.
       0.506
CKO_02461
Hypothetical protein; COG: NOG13868 non supervised orthologous group.
  
     0.438
CKO_03312
Hypothetical protein; COG: COG4533 ABC-type uncharacterized transport system, periplasmic component; Psort location: Cytoplasmic, score:8.96.
  
     0.419
cysG
Hypothetical protein; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme.
      
 0.415
CKO_05073
COG: COG2861 Uncharacterized protein conserved in bacteria.
  
     0.411
mdoG
Hypothetical protein; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs).
      
 0.407
CKO_01638
Hypothetical protein; COG: NOG08686 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.50.
  
     0.402
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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