STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00338Hypothetical protein; COG: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein. (96 aa)    
Predicted Functional Partners:
CKO_00339
Hypothetical protein; COG: COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein; Psort location: Cytoplasmic, score:8.96.
 
 
 
 0.964
CKO_00787
Hypothetical protein; COG: COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein.
 
 
 0.925
CKO_00782
Hypothetical protein; COG: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein.
 
 
 
 0.917
CKO_00340
Hypothetical protein; KEGG: rru:Rru_A0914 9.8e-102 aldehyde dehydrogenase K04021; COG: COG1012 NAD-dependent aldehyde dehydrogenases; Psort location: Cytoplasmic, score:8.96.
 
  
 0.863
CKO_00341
Hypothetical protein; COG: COG4820 Ethanolamine utilization protein, possible chaperonin; Psort location: Cytoplasmic, score:8.96.
 
  
 0.843
CKO_00333
Hypothetical protein; KEGG: lwe:lwe0363 0.0046 PTS system; fructose-specific IIB component K00890; COG: COG4810 Ethanolamine utilization protein; Psort location: Cytoplasmic, score:8.96.
 
  
 0.834
CKO_00334
Hypothetical protein; KEGG: eci:UTI89_C2785 5.8e-72 eutP; ethanolamine utilization protein EutP K04029; COG: COG4917 Ethanolamine utilization protein; Belongs to the EutP/PduV family.
 
  
 0.772
CKO_00335
Hypothetical protein; COG: COG4766 Ethanolamine utilization protein; Psort location: Cytoplasmic, score:8.96.
 
  
 0.765
CKO_00336
Hypothetical protein; KEGG: stm:STM2467 2.8e-127 eutT; putative cobalamin adenosyltransferase, ethanolamine utilization K04032; COG: COG4812 Ethanolamine utilization cobalamin adenosyltransferase; Psort location: Cytoplasmic, score:8.96.
 
  
 0.714
CKO_00785
Hypothetical protein; KEGG: rru:Rru_A0914 1.9e-112 aldehyde dehydrogenase K04021; COG: COG1012 NAD-dependent aldehyde dehydrogenases; Psort location: OuterMembrane, score:9.96.
 
  
 0.680
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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