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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00352Hypothetical protein. (45 aa)    
Predicted Functional Partners:
CKO_00353
Hypothetical protein; KEGG: eci:UTI89_C2767 5.2e-71 ypeA; hypothetical protein YpeA K00680; COG: COG0456 Acetyltransferases; Psort location: Cytoplasmic, score:8.96.
       0.603
CKO_00354
Hypothetical protein; COG: NOG08687 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.46.
       0.603
hemF
Hypothetical protein; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX.
       0.568
CKO_00351
Hypothetical protein; KEGG: eci:UTI89_C2768 1.4e-141 amiA; probable N-acetylmuramoyl-L-alanine amidase AmiA precursor K01448; COG: COG0860 N-acetylmuramoyl-L-alanine amidase.
       0.568
CKO_00355
Hypothetical protein; COG: NOG06776 non supervised orthologous group.
       0.430
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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