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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00355Hypothetical protein; COG: NOG06776 non supervised orthologous group. (181 aa)    
Predicted Functional Partners:
CKO_04333
Hypothetical protein; COG: NOG06291 non supervised orthologous group.
  
    0.796
CKO_01751
Hypothetical protein; COG: NOG07880 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.46.
  
   
 0.772
CKO_00036
Hypothetical protein; KEGG: aci:ACIAD3598 0.0040 putative glucose dehydrogenase precursor K00120; COG: COG5645 Predicted periplasmic lipoprotein.
  
     0.768
CKO_02034
Hypothetical protein; KEGG: vfi:VFA0083 2.8e-08 ynfI; anaerobic dimethyl sulfoxide reductase chain YnfI K00397; COG: COG3381 Uncharacterized component of anaerobic dehydrogenases.
  
     0.767
CKO_03245
Hypothetical protein; COG: NOG09835 non supervised orthologous group.
  
     0.764
CKO_01169
COG: COG3140 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score:8.96; Belongs to the UPF0181 family.
  
     0.760
CKO_03177
Hypothetical protein; COG: COG4568 Transcriptional antiterminator; Psort location: Cytoplasmic, score:8.96.
  
     0.759
secM
Hypothetical protein; Regulates secA expression by translational coupling of the secM secA operon. Translational pausing at a specific Pro residue 5 residues before the end of the protein may allow disruption of a mRNA repressor helix that normally suppresses secA translation initiation. Belongs to the SecM family.
  
     0.752
CKO_00315
Hypothetical protein; COG: NOG13899 non supervised orthologous group.
  
     0.751
CKO_02000
Hypothetical protein; COG: NOG07875 non supervised orthologous group.
  
     0.751
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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