STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00416Hypothetical protein; KEGG: eco:b2384 9.0e-163 ypdE; predicted peptidase K01269; COG: COG1363 Cellulase M and related proteins; Psort location: Cytoplasmic, score:8.96. (345 aa)    
Predicted Functional Partners:
CKO_00415
Hypothetical protein; KEGG: eco:b2385 8.1e-146 ypdF; putative peptidase K08326; COG: COG0006 Xaa-Pro aminopeptidase; Psort location: Cytoplasmic, score:8.96.
 
  
 0.917
CKO_00414
Hypothetical protein; KEGG: ecc:c2925 2.2e-207 putative PTS system IIC component ypdG K02770; COG: COG1299 Phosphotransferase system, fructose-specific IIC component; Psort location: CytoplasmicMembrane, score:10.00.
 
     0.806
CKO_00417
Hypothetical protein; KEGG: sfx:S2588 0. putative PTS system enzyme IIA component, enzyme I K02766:K02768; COG: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); Psort location: Cytoplasmic, score:9.97; Belongs to the PEP-utilizing enzyme family.
  
    0.750
CKO_00413
Hypothetical protein; KEGG: ecc:c2926 3.9e-50 putative PTS system IIB component ypdH K02769; COG: COG1445 Phosphotransferase system fructose-specific component IIB.
       0.714
glk
Hypothetical protein; KEGG: stm:STM2403 5.7e-161 glk; glucokinase K00845; COG: COG0837 Glucokinase; Psort location: Cytoplasmic, score:9.97; Belongs to the bacterial glucokinase family.
       0.429
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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