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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00430Hypothetical protein; KEGG: hma:rrnAC3411 1.3e-12 metal dependent amidohydrolase superfamily protein K01443:K01427:K01465:K01486; COG: COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold. (631 aa)    
Predicted Functional Partners:
CKO_00431
COG: COG4317 Uncharacterized protein conserved in bacteria.
 
     0.952
CKO_00429
COG: COG2259 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:9.46.
 
     0.942
CKO_00432
Hypothetical protein; KEGG: reh:H16_B0343 2.4e-89 hydrolase K01463; COG: COG1335 Amidases related to nicotinamidase.
 
   
 0.913
CKO_03695
COG: COG3030 Protein affecting phage T7 exclusion by the F plasmid; Psort location: CytoplasmicMembrane, score:10.00.
  
    0.818
CKO_02173
Hypothetical protein; KEGG: reh:H16_A0619 1.9e-96 YcaC related amidohydrolase K00517; COG: COG1335 Amidases related to nicotinamidase.
 
   
 0.727
CKO_04375
Hypothetical protein; KEGG: bur:Bcep18194_C7479 2.5e-128 alpha/beta hydrolase K00433; COG: COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
     0.721
CKO_02194
Hypothetical protein; KEGG: psp:PSPPH_0909 9.7e-47 isochorismatase family protein K05993; COG: COG1335 Amidases related to nicotinamidase; Psort location: Cytoplasmic, score:8.96.
 
   
 0.706
CKO_00441
Hypothetical protein; KEGG: ace:Acel_1971 3.6e-14 dTMP kinase K00943; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:10.00.
 
     0.653
CKO_00843
Hypothetical protein; COG: NOG17459 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
 
     0.630
CKO_00433
Hypothetical protein.
       0.430
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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