STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00460Hypothetical protein; COG: NOG13546 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96. (92 aa)    
Predicted Functional Partners:
seqA
Hypothetical protein; Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated.
  
     0.764
CKO_01325
COG: COG3099 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score:8.96; Belongs to the UPF0263 family.
  
     0.762
CKO_00587
COG: COG3082 Uncharacterized protein conserved in bacteria; Belongs to the UPF0352 family.
  
     0.759
zapC
Hypothetical protein; Contributes to the efficiency of the cell division process by stabilizing the polymeric form of the cell division protein FtsZ. Acts by promoting interactions between FtsZ protofilaments and suppressing the GTPase activity of FtsZ.
  
     0.749
CKO_04757
Hypothetical protein; COG: COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain; Psort location: Cytoplasmic, score:8.96.
  
     0.745
CKO_00108
Hypothetical protein; KEGG: sec:SC3807 4.1e-39 ilvM; acetolactate synthase II, small subunit K01653; COG: COG3978 Acetolactate synthase (isozyme II), small (regulatory) subunit; Psort location: Cytoplasmic, score:8.96.
  
     0.732
CKO_00459
COG: COG3101 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score:8.96.
  
    0.716
bamC
Hypothetical protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
     0.713
CKO_00079
Hypothetical protein; KEGG: psp:PSPPH_5214 2.0e-07 atpI; ATP synthase F0, I subunit K02116; COG: COG3312 F0F1-type ATP synthase, subunit I; Psort location: CytoplasmicMembrane, score:9.46.
  
     0.711
CKO_00458
Hypothetical protein; COG: COG0730 Predicted permeases; Psort location: CytoplasmicMembrane, score:10.00.
  
    0.710
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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