Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00464Hypothetical protein; KEGG: eci:UTI89_C5041 8.8e-07 yjiJ; hypothetical protein YjiJ K00403; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:10.00. (392 aa)    
Predicted Functional Partners:
CKO_02046
COG: COG3729 General stress protein.
  
     0.555
CKO_03984
Hypothetical protein; COG: COG3718 Uncharacterized enzyme involved in inositol metabolism; Psort location: Cytoplasmic, score:8.96.
   
    0.480
CKO_00463
Hypothetical protein; COG: NOG26784 non supervised orthologous group.
       0.461
CKO_03985
Hypothetical protein; KEGG: hne:HNE_2184 2.4e-73 iolE; 2-keto-myo-inositol dehydratase K01726; COG: COG1082 Sugar phosphate isomerases/epimerases; Psort location: Cytoplasmic, score:8.96.
   
    0.442
CKO_01145
Hypothetical protein; KEGG: sgl:SG1466 2.8e-06 dethiobiotin synthase K01935; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:10.00.
  
   
 0.438
CKO_01498
COG: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family.
  
     0.419
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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