STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00478Hypothetical protein; KEGG: bur:Bcep18194_A4695 3.7e-31 ABC polar amino acid transporter, periplasmic ligand binding protein K01713; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Psort location: Periplasmic, score:10.00; Belongs to the bacterial solute-binding protein 3 family. (260 aa)    
Predicted Functional Partners:
CKO_00479
Hypothetical protein; KEGG: eca:ECA0855 4.8e-22 ABC transporter permease protein K02028; COG: COG4215 ABC-type arginine transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 0.985
CKO_00480
Hypothetical protein; KEGG: sma:SAV6546 2.8e-24 putative ABC transporter permease K02028; COG: COG4160 ABC-type arginine/histidine transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.980
CKO_01027
Hypothetical protein; KEGG: hpa:HPAG1_0922 8.3e-41 amino acid ABC transporter, permease protein; COG: COG0765 ABC-type amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.979
CKO_02312
Hypothetical protein; KEGG: bja:blr4464 9.0e-28 probable ABC transporter ATP-binding/permease protein K02028:K02029; COG: COG0765 ABC-type amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.978
CKO_00481
Hypothetical protein; KEGG: sfl:SF2382 1.5e-128 hisP; ATP-binding component of histidine transport K02028; COG: COG4598 ABC-type histidine transport system, ATPase component; Psort location: CytoplasmicMembrane, score:7.88.
 
 
 0.977
CKO_02510
Hypothetical protein; KEGG: ret:RHE_PF00254 3.3e-26 glnP, glnQ; glutamine ABC transporter, ATP-binding protein K02028; COG: COG0765 ABC-type amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.869
CKO_02242
Hypothetical protein; KEGG: eca:ECA0855 8.0e-20 ABC transporter permease protein K02028; COG: COG4160 ABC-type arginine/histidine transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
  
 0.844
CKO_01028
Hypothetical protein; KEGG: ssn:SSO_1201 5.8e-120 yecC; putative ATP-binding component of a transport system K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: CytoplasmicMembrane, score:7.88.
 
 
 0.821
CKO_02241
Hypothetical protein; KEGG: eca:ECA0855 1.6e-21 ABC transporter permease protein K02028; COG: COG4215 ABC-type arginine transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.820
CKO_02509
Hypothetical protein; KEGG: eca:ECA0855 1.0e-19 ABC transporter permease protein K02028; COG: COG0765 ABC-type amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.811
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.