close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00503Hypothetical protein; COG: COG0471 Di- and tricarboxylate transporters; Psort location: CytoplasmicMembrane, score:10.00. (610 aa)    
Predicted Functional Partners:
CKO_00501
Hypothetical protein; COG: COG3013 Uncharacterized conserved protein; Psort location: Cytoplasmic, score:8.96; Belongs to the UPF0304 family.
       0.610
CKO_00502
Hypothetical protein; KEGG: eci:UTI89_C2575 2.6e-94 yfbT; protein YfbT K01112; COG: COG0637 Predicted phosphatase/phosphohexomutase; Psort location: Cytoplasmic, score:8.96.
       0.610
CKO_00500
COG: COG3092 Uncharacterized protein conserved in bacteria.
       0.471
CKO_02686
Hypothetical protein; KEGG: cal:orf19.4683 1.0e-06 MLP1; myosin-like protein involved in translocation of macromolecules between the nucleoplasm and the NPC K01553; COG: COG3264 Small-conductance mechanosensitive channel; Psort location: CytoplasmicMembrane, score:10.00.
 
    0.448
CKO_01270
Hypothetical protein; KEGG: eci:UTI89_C1400 1.7e-271 ychM; putative sulfate transporter YchM K03321; COG: COG0659 Sulfate permease and related transporters (MFS superfamily); Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.433
CKO_00497
Hypothetical protein; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
    0.418
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.