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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00532Hypothetical protein; COG: NOG08732 non supervised orthologous group. (180 aa)    
Predicted Functional Partners:
CKO_04981
Hypothetical protein; KEGG: vfi:VFA0886 8.9e-26 zinc metalloprotease; COG: NOG14695 non supervised orthologous group.
  
     0.763
sulA
Hypothetical protein; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division.
  
     0.746
CKO_04897
COG: COG3714 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.734
CKO_04973
Hypothetical protein; KEGG: eci:UTI89_C4062 0. yhjL; cellulose synthase operon protein C K00694; COG: COG0457 FOG: TPR repeat; Psort location: OuterMembrane, score:9.52.
  
     0.733
CKO_04983
Hypothetical protein; COG: NOG05994 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.46.
  
     0.717
CKO_00533
Hypothetical protein; KEGG: mmu:319945 0.00037 Flad1; RFad1, flavin adenine dinucleotide synthetase, homolog (yeast) K00953; COG: COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; Belongs to the CinA family.
 
     0.698
CKO_01989
Hypothetical protein; COG: COG3418 Flagellar biosynthesis/type III secretory pathway chaperone.
  
     0.698
CKO_01638
Hypothetical protein; COG: NOG08686 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.50.
  
     0.683
CKO_02267
Hypothetical protein; KEGG: shn:Shewana3_1692 5.4e-07 Xaa-His dipeptidase K01270; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.654
sbmC
Hypothetical protein; Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell.
  
     0.650
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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