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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00564Hypothetical protein; Acts as a magnesium transporter. (478 aa)    
Predicted Functional Partners:
CKO_00563
Hypothetical protein; KEGG: reh:H16_B1682 8.0e-91 ABC-type transporter, ATPase and permease components: Pep3E family; COG: COG4615 ABC-type siderophore export system, fused ATPase and permease components; Psort location: CytoplasmicMembrane, score:10.00.
      0.763
CKO_00561
Hypothetical protein; KEGG: sfx:S2427 1.7e-159 ada; O6-methylguanine-DNA methyltransferase; transcription activator/repressor K00567; COG: COG0350 Methylated DNA-protein cysteine methyltransferase.
       0.463
CKO_04702
Hypothetical protein; KEGG: gka:GK3448 0.00083 stage V sporulation protein N (L-alanine dehydrogenase K00259; COG: COG0569 K+ transport systems, NAD-binding component; Psort location: Cytoplasmic, score:8.96.
 
   
 0.440
mqo
Hypothetical protein; KEGG: eci:UTI89_C2490 3.3e-259 mqo; malate dehydrogenase K00116; COG: COG0579 Predicted dehydrogenase.
       0.424
guaA
Hypothetical protein; Catalyzes the synthesis of GMP from XMP.
  
  
 0.422
CKO_00562
Hypothetical protein; COG: COG3145 Alkylated DNA repair protein.
       0.418
CKO_00417
Hypothetical protein; KEGG: sfx:S2588 0. putative PTS system enzyme IIA component, enzyme I K02766:K02768; COG: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); Psort location: Cytoplasmic, score:9.97; Belongs to the PEP-utilizing enzyme family.
     
 0.405
CKO_03046
Hypothetical protein; KEGG: sec:SC4002 0. ptsA; general PTS family, enzyme I K02766:K02768; COG: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); Psort location: Cytoplasmic, score:9.97.
     
 0.405
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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