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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00639COG: COG2311 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:10.00. (385 aa)    
Predicted Functional Partners:
folE
Hypothetical protein; KEGG: ssn:SSO_2209 4.1e-110 folE; GTP cyclohydrolase I K01495; COG: COG0302 GTP cyclohydrolase I.
     
 0.780
wecF
Hypothetical protein; Catalyzes the synthesis of Und-PP-GlcNAc-ManNAcA-Fuc4NAc (Lipid III), the third lipid-linked intermediate involved in ECA synthesis; Belongs to the glycosyltransferase 56 family.
  
   
 0.712
wecD
Hypothetical protein; Catalyzes the acetylation of dTDP-fucosamine (dTDP-4-amino- 4,6-dideoxy-D-galactose) to dTDP-Fuc4NAc, which is utilized in the biosynthesis of the enterobacterial common antigen (ECA). Belongs to the WecD family.
  
  
 0.638
CKO_01332
Hypothetical protein; COG: NOG06197 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.626
wzyE
Hypothetical protein; Probably involved in the polymerization of enterobacterial common antigen (ECA) trisaccharide repeat units; Belongs to the WzyE family.
  
     0.617
CKO_02727
COG: COG3056 Uncharacterized lipoprotein.
  
     0.615
CKO_02666
COG: COG3735 Uncharacterized protein conserved in bacteria.
  
     0.581
aaeX
Hypothetical protein; COG: NOG13538 non supervised orthologous group.
  
     0.569
CKO_01030
Hypothetical protein; COG: NOG13894 non supervised orthologous group.
  
     0.562
CKO_03861
Hypothetical protein; KEGG: mfa:Mfla_1448 0.0052 cytochrome-c oxidase K00403; COG: NOG09019 non supervised orthologous group.
  
     0.560
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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