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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00641Hypothetical protein; KEGG: msm:MSMEG_3095 2.9e-14 D-ribose-binding periplasmic protein; COG: COG1879 ABC-type sugar transport system, periplasmic component; Psort location: Periplasmic, score:10.00. (332 aa)    
Predicted Functional Partners:
CKO_00642
Hypothetical protein; KEGG: eco:b2149 5.2e-254 mglA, mglP, PMG, mgl; ATP-binding component of methyl-galactoside transport and galactose taxis K02056; COG: COG1129 ABC-type sugar transport system, ATPase component; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.989
CKO_00643
Hypothetical protein; KEGG: msm:MSMEG_4171 5.9e-40 ribose transport system permease protein RbsC; COG: COG4211 ABC-type glucose/galactose transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
 
 0.986
CKO_01456
Hypothetical protein; KEGG: bxe:Bxe_C0521 6.9e-05 multi sensor hybrid histidine kinase; COG: COG0840 Methyl-accepting chemotaxis protein; Psort location: CytoplasmicMembrane, score:10.00.
    
 0.906
CKO_04139
Hypothetical protein; KEGG: spt:SPA2823 0. barA; sensor protein; COG: COG0784 FOG: CheY-like receiver; Psort location: CytoplasmicMembrane, score:9.99.
   
 
 0.860
CKO_04368
Hypothetical protein; KEGG: sbo:SBO_2396 2.5e-190 evgS, evgA; putative sensor for regulator EvgA K07679; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Psort location: CytoplasmicMembrane, score:9.82.
  
 
 0.860
rcsC
Hypothetical protein; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB.
   
 
 0.791
CKO_00090
Hypothetical protein; KEGG: msm:MSMEG_4171 7.1e-67 ribose transport system permease protein RbsC; COG: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00.
 
 
 0.736
CKO_03980
Hypothetical protein; KEGG: msm:MSMEG_4171 1.1e-45 ribose transport system permease protein RbsC; COG: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00.
 
 
 0.734
CKO_03988
Hypothetical protein; KEGG: msm:MSMEG_4171 1.6e-60 ribose transport system permease protein RbsC; COG: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00.
 
 
 0.730
CKO_03600
Hypothetical protein; KEGG: msm:MSMEG_3090 4.3e-44 ribose transport system permease protein RbsC; COG: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00.
 
 
 0.725
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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