Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CKO_00643Hypothetical protein; KEGG: msm:MSMEG_4171 5.9e-40 ribose transport system permease protein RbsC; COG: COG4211 ABC-type glucose/galactose transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00. (336 aa)    
Predicted Functional Partners:
CKO_00642
Hypothetical protein; KEGG: eco:b2149 5.2e-254 mglA, mglP, PMG, mgl; ATP-binding component of methyl-galactoside transport and galactose taxis K02056; COG: COG1129 ABC-type sugar transport system, ATPase component; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.999
CKO_00641
Hypothetical protein; KEGG: msm:MSMEG_3095 2.9e-14 D-ribose-binding periplasmic protein; COG: COG1879 ABC-type sugar transport system, periplasmic component; Psort location: Periplasmic, score:10.00.
 
 
 0.990
rbsA
Hypothetical protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
 0.819
CKO_03989
Hypothetical protein; KEGG: yps:YPTB1075 3.8e-242 ABC type sugar transporter with fused ATP-binding domains K02056; COG: COG1129 ABC-type sugar transport system, ATPase component; Psort location: CytoplasmicMembrane, score:8.02.
  
 0.810
xylG
Hypothetical protein; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family.
  
 0.809
araG
Hypothetical protein; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family.
 
  
 0.805
CKO_03786
Hypothetical protein; KEGG: ecc:c5093 5.8e-255 yjcW; D-allose transport ATP-binding protein alsA K02056; COG: COG1129 ABC-type sugar transport system, ATPase component; Psort location: CytoplasmicMembrane, score:9.82.
  
 0.792
CKO_03785
Hypothetical protein; KEGG: msm:MSMEG_3095 2.5e-23 D-ribose-binding periplasmic protein; COG: COG1879 ABC-type sugar transport system, periplasmic component; Psort location: Periplasmic, score:9.76.
 
  
 0.782
CKO_03990
Hypothetical protein; KEGG: msm:MSMEG_3095 3.5e-19 D-ribose-binding periplasmic protein; COG: COG1879 ABC-type sugar transport system, periplasmic component; Psort location: Periplasmic, score:9.76.
 
  
 0.782
CKO_03602
Hypothetical protein; KEGG: ecc:c5326 4.2e-252 ytfR; putative ATP-binding component of a transport system K02056; COG: COG1129 ABC-type sugar transport system, ATPase component; Psort location: CytoplasmicMembrane, score:9.98.
  
 0.763
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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