close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00682Hypothetical protein; KEGG: reh:H16_B1289 5.2e-16 phnF; regulator of phosphonate operon, GntR-family; COG: COG2188 Transcriptional regulators; Psort location: Cytoplasmic, score:8.96. (248 aa)    
Predicted Functional Partners:
CKO_03396
Hypothetical protein; KEGG: stm:STM4580.S 1.5e-217 nadR; nicotinamide-nucleotide adenylyltransferase K00952:K06210:K06211; COG: COG3172 Predicted ATPase/kinase involved in NAD metabolism; Psort location: Cytoplasmic, score:8.96.
   
  
 0.850
CKO_00681
Hypothetical protein; KEGG: ece:Z3267 4.7e-134 thiD; phosphomethylpyrimidine kinase K00877:K00941; COG: COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; Psort location: Cytoplasmic, score:8.96.
  
    0.721
thiM
Hypothetical protein; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.
       0.672
CKO_00684
Hypothetical protein; KEGG: ecj:JW2086 8.0e-162 yegU; predicted hydrolase K05521; COG: COG1397 ADP-ribosylglycohydrolase.
 
    0.576
CKO_00683
Hypothetical protein; KEGG: ape:APE_0012 3.3e-14 ribokinase K00852; COG: COG0524 Sugar kinases, ribokinase family.
 
   
 0.574
CKO_02485
Hypothetical protein; KEGG: spt:SPA2056 0. nagE; pts system, N-acetylglucosamine-specific IIABC component K02802:K02803:K02804; COG: COG2190 Phosphotransferase system IIA components; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.533
CKO_03107
Hypothetical protein; KEGG: psp:PSPPH_2917 9.5e-09 DNA-binding protein K00517; COG: COG1396 Predicted transcriptional regulators; Psort location: Cytoplasmic, score:8.96.
  
  
 0.532
CKO_01760
Hypothetical protein; KEGG: bce:BC3740 2.6e-07 ADA regulatory protein K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins.
  
  
 0.524
CKO_03095
Hypothetical protein; KEGG: bcz:BCZK3497 1.9e-09 adaA; transcriptional regulator, AraC family K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score:9.97.
  
  
 0.524
CKO_04535
Hypothetical protein; KEGG: ecp:ECP_3227 7.3e-168 putative N-acetylgalctosamine-6-phosphate deacetylase K02079; COG: COG1820 N-acetylglucosamine-6-phosphate deacetylase; Psort location: Periplasmic, score:9.64.
 
  
 0.472
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.