STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00694Hypothetical protein; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:10.00. (425 aa)    
Predicted Functional Partners:
CKO_00695
Hypothetical protein; KEGG: aha:AHA_2118 2.8e-33 phosphatase YniC K01112; COG: COG0637 Predicted phosphatase/phosphohexomutase; Psort location: Cytoplasmic, score:8.96.
       0.637
xylB
Hypothetical protein; KEGG: bxe:Bxe_A0729 4.1e-158 xylulokinase K00854; COG: COG1070 Sugar (pentulose and hexulose) kinases.
       0.592
CKO_00692
Hypothetical protein; KEGG: ype:YPO2325 8.0e-162 dalD; D-arabinitol 4-dehydrogenase K00007; COG: COG0246 Mannitol-1-phosphate/altronate dehydrogenases.
       0.584
CKO_02643
COG: COG3203 Outer membrane protein (porin); Psort location: OuterMembrane, score:9.52.
  
     0.583
CKO_04764
Hypothetical protein; KEGG: azo:azo2534 5.6e-19 mdcF2; putative malonate transporter; COG: COG0679 Predicted permeases; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.573
CKO_01293
Hypothetical protein; KEGG: eca:ECA2991 0. nasB; nitrite reductase [NAD(P)H] large subunit K00362; COG: COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases; Psort location: Cytoplasmic, score:9.26; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
  
 0.483
cysG
Hypothetical protein; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme.
  
  
 0.471
CKO_01301
Hypothetical protein; KEGG: spt:SPA1109 0. narG; respiratory nitrate reductase 1 alpha chain K00370; COG: COG5013 Nitrate reductase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 0.467
CKO_01503
Hypothetical protein; KEGG: stm:STM1577 0. narZ; nitrate reductase alpha chain K08345; COG: COG5013 Nitrate reductase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 0.467
CKO_01599
Hypothetical protein; COG: COG1266 Predicted metal-dependent membrane protease; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.463
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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