Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKO_00719 | CKO_00720 | CKO_00719 | CKO_00720 | Hypothetical protein; KEGG: eci:UTI89_C0656 1.0e-24 ybeX; putative transport protein K06189; COG: COG1253 Hemolysins and related proteins containing CBS domains; Psort location: CytoplasmicMembrane, score:10.00. | Hypothetical protein. | 0.561 |
CKO_00719 | CKO_03039 | CKO_00719 | CKO_03039 | Hypothetical protein; KEGG: eci:UTI89_C0656 1.0e-24 ybeX; putative transport protein K06189; COG: COG1253 Hemolysins and related proteins containing CBS domains; Psort location: CytoplasmicMembrane, score:10.00. | Hypothetical protein; KEGG: pha:PSHAa2772 3.1e-21 eptA; lipid A phosphoethanolamine transferase, associated with polymyxin resistance K03760; COG: COG2194 Predicted membrane-associated, metal-dependent hydrolase; Psort location: CytoplasmicMembrane, score:10.00. | 0.410 |
CKO_00719 | CKO_04413 | CKO_00719 | CKO_04413 | Hypothetical protein; KEGG: eci:UTI89_C0656 1.0e-24 ybeX; putative transport protein K06189; COG: COG1253 Hemolysins and related proteins containing CBS domains; Psort location: CytoplasmicMembrane, score:10.00. | Hypothetical protein; COG: COG3111 Uncharacterized conserved protein. | 0.453 |
CKO_00719 | guaA | CKO_00719 | CKO_00280 | Hypothetical protein; KEGG: eci:UTI89_C0656 1.0e-24 ybeX; putative transport protein K06189; COG: COG1253 Hemolysins and related proteins containing CBS domains; Psort location: CytoplasmicMembrane, score:10.00. | Hypothetical protein; Catalyzes the synthesis of GMP from XMP. | 0.464 |
CKO_00719 | ybeY | CKO_00719 | CKO_02504 | Hypothetical protein; KEGG: eci:UTI89_C0656 1.0e-24 ybeX; putative transport protein K06189; COG: COG1253 Hemolysins and related proteins containing CBS domains; Psort location: CytoplasmicMembrane, score:10.00. | Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.457 |
CKO_00720 | CKO_00719 | CKO_00720 | CKO_00719 | Hypothetical protein. | Hypothetical protein; KEGG: eci:UTI89_C0656 1.0e-24 ybeX; putative transport protein K06189; COG: COG1253 Hemolysins and related proteins containing CBS domains; Psort location: CytoplasmicMembrane, score:10.00. | 0.561 |
CKO_03039 | CKO_00719 | CKO_03039 | CKO_00719 | Hypothetical protein; KEGG: pha:PSHAa2772 3.1e-21 eptA; lipid A phosphoethanolamine transferase, associated with polymyxin resistance K03760; COG: COG2194 Predicted membrane-associated, metal-dependent hydrolase; Psort location: CytoplasmicMembrane, score:10.00. | Hypothetical protein; KEGG: eci:UTI89_C0656 1.0e-24 ybeX; putative transport protein K06189; COG: COG1253 Hemolysins and related proteins containing CBS domains; Psort location: CytoplasmicMembrane, score:10.00. | 0.410 |
CKO_04413 | CKO_00719 | CKO_04413 | CKO_00719 | Hypothetical protein; COG: COG3111 Uncharacterized conserved protein. | Hypothetical protein; KEGG: eci:UTI89_C0656 1.0e-24 ybeX; putative transport protein K06189; COG: COG1253 Hemolysins and related proteins containing CBS domains; Psort location: CytoplasmicMembrane, score:10.00. | 0.453 |
guaA | CKO_00719 | CKO_00280 | CKO_00719 | Hypothetical protein; Catalyzes the synthesis of GMP from XMP. | Hypothetical protein; KEGG: eci:UTI89_C0656 1.0e-24 ybeX; putative transport protein K06189; COG: COG1253 Hemolysins and related proteins containing CBS domains; Psort location: CytoplasmicMembrane, score:10.00. | 0.464 |
ybeY | CKO_00719 | CKO_02504 | CKO_00719 | Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | Hypothetical protein; KEGG: eci:UTI89_C0656 1.0e-24 ybeX; putative transport protein K06189; COG: COG1253 Hemolysins and related proteins containing CBS domains; Psort location: CytoplasmicMembrane, score:10.00. | 0.457 |