STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00723COG: COG1596 Periplasmic protein involved in polysaccharide export; Psort location: OuterMembrane, score:9.92. (379 aa)    
Predicted Functional Partners:
CKO_00725
Hypothetical protein; KEGG: ssn:SSO_2113 0. putative tyrosine-protein kinase; K00903 protein-tyrosine kinase K00903; COG: COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis; Psort location: CytoplasmicMembrane, score:9.82.
 
 
 0.999
CKO_00755
Hypothetical protein; KEGG: stm:STM2082 2.0e-213 rfbP; LPS side chain defect: bifunctional enzyme: undecaprenol-phosphate galactosephosphotransferase, and O-antigen transfer K00996; COG: COG2148 Sugar transferases involved in lipopolysaccharide synthesis; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.964
CKO_00724
Hypothetical protein; KEGG: spt:SPA0749 1.2e-66 wzb; putative protein-tyrosine phosphatase K01104; COG: COG0394 Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
 0.944
CKO_00738
Hypothetical protein; KEGG: eci:UTI89_C2320 4.1e-229 wcaJ; putative colanic acid biosynthsis UDP-glucose lipid carrier transferase K03606; COG: COG2148 Sugar transferases involved in lipopolysaccharide synthesis; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.857
CKO_00736
Hypothetical protein; KEGG: ecp:ECP_2089 1.3e-248 mannose-1-phosphate guanylyltransferase K00971; COG: COG0662 Mannose-6-phosphate isomerase; Psort location: Cytoplasmic, score:8.96.
 
  
 0.853
CKO_00728
Hypothetical protein; KEGG: eci:UTI89_C2331 1.5e-190 wcaC; putative glycosyltransferase K00754; COG: COG0438 Glycosyltransferase.
 
  
 0.755
CKO_00672
Hypothetical protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 
 0.752
CKO_00730
Hypothetical protein; KEGG: eci:UTI89_C2329 1.8e-93 wcaE; putative colanic acid biosynthesis glycosyl transferase; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
  
 0.751
CKO_00726
Hypothetical protein; KEGG: eci:UTI89_C2333 2.8e-143 wcaA; putative colanic acid biosynthesis glycosyltransferase WcaA; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis; Psort location: Cytoplasmic, score:8.96.
 
  
 0.734
CKO_00735
Hypothetical protein; KEGG: eci:UTI89_C2324 2.3e-187 wcaI; putative colanic biosynthesis glycosyl transferase K03208; COG: COG0438 Glycosyltransferase.
 
  
 0.733
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.