STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00728Hypothetical protein; KEGG: eci:UTI89_C2331 1.5e-190 wcaC; putative glycosyltransferase K00754; COG: COG0438 Glycosyltransferase. (405 aa)    
Predicted Functional Partners:
CKO_00735
Hypothetical protein; KEGG: eci:UTI89_C2324 2.3e-187 wcaI; putative colanic biosynthesis glycosyl transferase K03208; COG: COG0438 Glycosyltransferase.
 
  
 0.982
CKO_00730
Hypothetical protein; KEGG: eci:UTI89_C2329 1.8e-93 wcaE; putative colanic acid biosynthesis glycosyl transferase; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
  
 0.978
gmm
Hypothetical protein; Hydrolyzes GDP-mannose; Belongs to the Nudix hydrolase family.
 
  
 0.969
CKO_00731
Hypothetical protein; KEGG: ecj:JW2039 1.2e-89 wcaF; predicted acyl transferase K03818; COG: COG0110 Acetyltransferase (isoleucine patch superfamily); Psort location: Cytoplasmic, score:9.26.
 
  
 0.964
gmd
Hypothetical protein; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 0.947
fcl
Hypothetical protein; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
 
  
 0.945
CKO_00727
Hypothetical protein; KEGG: stm:STM2114 2.3e-70 wcaB; putative acyl transferase in colanic acid biosynthesis K03819; COG: COG1045 Serine acetyltransferase; Psort location: Cytoplasmic, score:9.26.
 
  
 0.938
CKO_00726
Hypothetical protein; KEGG: eci:UTI89_C2333 2.8e-143 wcaA; putative colanic acid biosynthesis glycosyltransferase WcaA; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis; Psort location: Cytoplasmic, score:8.96.
 
  
 0.926
CKO_00739
COG: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.906
CKO_00729
Hypothetical protein; KEGG: gvi:gll1584 0.0099 ndhA; NADH dehydrogenase subunit 1 K05572; COG: NOG06759 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:10.00.
  
    0.900
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.