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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00740Hypothetical protein; KEGG: sbo:SBO_0872 2.4e-208 wcaK; putative galactokinase K00849; COG: COG2327 Uncharacterized conserved protein; Psort location: Cytoplasmic, score:8.96. (426 aa)    
Predicted Functional Partners:
CKO_00742
Hypothetical protein; KEGG: stm:STM2100 2.3e-180 wcaL; putative glycosyl transferase in colanic acid gene cluster; COG: COG0438 Glycosyltransferase; Psort location: Cytoplasmic, score:8.96.
 
  
 0.970
CKO_00739
COG: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.912
CKO_00728
Hypothetical protein; KEGG: eci:UTI89_C2331 1.5e-190 wcaC; putative glycosyltransferase K00754; COG: COG0438 Glycosyltransferase.
 
  
 0.875
CKO_00743
Hypothetical protein; KEGG: spt:SPA0767 8.0e-210 wcaM; hypothetical protein K01710; COG: NOG06875 non supervised orthologous group.
  
  
 0.784
CKO_00730
Hypothetical protein; KEGG: eci:UTI89_C2329 1.8e-93 wcaE; putative colanic acid biosynthesis glycosyl transferase; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
  
 0.767
CKO_00712
Hypothetical protein; KEGG: eci:UTI89_C2343 0. yegE; putative sensor-type protein; COG: COG2199 FOG: GGDEF domain; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.766
CKO_00744
Hypothetical protein.
       0.752
CKO_01989
Hypothetical protein; COG: COG3418 Flagellar biosynthesis/type III secretory pathway chaperone.
  
     0.745
CKO_00726
Hypothetical protein; KEGG: eci:UTI89_C2333 2.8e-143 wcaA; putative colanic acid biosynthesis glycosyltransferase WcaA; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis; Psort location: Cytoplasmic, score:8.96.
 
  
 0.734
CKO_02705
COG: COG3126 Uncharacterized protein conserved in bacteria.
  
     0.724
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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