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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00783Hypothetical protein; KEGG: eci:UTI89_C1819 3.8e-38 rnfC; electron transport complex protein RnfC K03615; COG: COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC; Psort location: Cytoplasmic, score:8.96. (451 aa)    
Predicted Functional Partners:
rnfD
Hypothetical protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.
 
 
 0.986
rnfG
Hypothetical protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.
 
 
 0.976
rnfE
Hypothetical protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
 
 
 0.973
rnfB
Hypothetical protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
 
 0.970
CKO_00782
Hypothetical protein; COG: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein.
 
  
 0.951
rnfA
Hypothetical protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
 
 
 0.937
CKO_00786
Hypothetical protein; KEGG: noc:Noc_0867 1.2e-27 cobalamin adenosyltransferase K00798; COG: COG2096 Uncharacterized conserved protein; Belongs to the Cob(I)alamin adenosyltransferase family.
 
 
 
 0.915
CKO_00787
Hypothetical protein; COG: COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein.
 
   
 0.891
CKO_00780
Hypothetical protein; KEGG: ctc:CTC01446 3.3e-14 lysine-sensitive aspartokinase III K00928; COG: COG4917 Ethanolamine utilization protein; Belongs to the EutP/PduV family.
 
    0.870
CKO_00781
Hypothetical protein; COG: COG4810 Ethanolamine utilization protein; Psort location: Cytoplasmic, score:8.96.
 
    0.863
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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