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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00787Hypothetical protein; COG: COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein. (91 aa)    
Predicted Functional Partners:
CKO_00782
Hypothetical protein; COG: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein.
 
 
 
 0.985
CKO_00790
Hypothetical protein; COG: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein.
 
 
 0.966
CKO_00791
Hypothetical protein; COG: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein.
 
 
 0.964
CKO_00785
Hypothetical protein; KEGG: rru:Rru_A0914 1.9e-112 aldehyde dehydrogenase K04021; COG: COG1012 NAD-dependent aldehyde dehydrogenases; Psort location: OuterMembrane, score:9.96.
 
   
 0.956
CKO_00798
Hypothetical protein; COG: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein.
 
 
 0.956
CKO_00338
Hypothetical protein; COG: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein.
 
 
 0.925
pduL
Hypothetical protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.
 
   
 0.924
CKO_00781
Hypothetical protein; COG: COG4810 Ethanolamine utilization protein; Psort location: Cytoplasmic, score:8.96.
 
   
 0.923
CKO_00348
Hypothetical protein; COG: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein.
 
 
 
 0.918
CKO_00780
Hypothetical protein; KEGG: ctc:CTC01446 3.3e-14 lysine-sensitive aspartokinase III K00928; COG: COG4917 Ethanolamine utilization protein; Belongs to the EutP/PduV family.
 
   
 0.915
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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