close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00797Hypothetical protein; KEGG: ama:AM747 0.0038 nuoK; NADH dehydrogenase chain K K00340; COG: COG4816 Ethanolamine utilization protein. (270 aa)    
Predicted Functional Partners:
CKO_00795
Hypothetical protein; KEGG: stm:STM2041 2.4e-107 pduD; Propanediol utilization: dehydratase, medium subunit K06121; COG: COG4909 Propanediol dehydratase, large subunit; Psort location: Cytoplasmic, score:8.96.
 
  
 0.977
CKO_00796
Hypothetical protein; KEGG: stm:STM2040 2.0e-291 pduC; glycerol dehydratase large subunit K06120; COG: COG4909 Propanediol dehydratase, large subunit; Psort location: Cytoplasmic, score:8.96.
 
  
 0.977
CKO_00794
Hypothetical protein; KEGG: sec:SC2050 7.6e-79 pduE; propanediol utilization: dehydratase, small subunit K06122; COG: COG4910 Propanediol dehydratase, small subunit.
 
  
 0.967
CKO_00793
Hypothetical protein; COG: NOG06036 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
 
  
 0.963
CKO_00792
Hypothetical protein; KEGG: ssn:SSO_2061 0.00025 pduD; putative propanediol utilization protein: diol dehydratase medium subunit K06121; COG: NOG12182 non supervised orthologous group.
 
  
 0.962
CKO_00786
Hypothetical protein; KEGG: noc:Noc_0867 1.2e-27 cobalamin adenosyltransferase K00798; COG: COG2096 Uncharacterized conserved protein; Belongs to the Cob(I)alamin adenosyltransferase family.
 
  
 0.913
CKO_00790
Hypothetical protein; COG: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein.
 
  
 0.912
CKO_00798
Hypothetical protein; COG: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein.
 
  
 0.886
CKO_00785
Hypothetical protein; KEGG: rru:Rru_A0914 1.9e-112 aldehyde dehydrogenase K04021; COG: COG1012 NAD-dependent aldehyde dehydrogenases; Psort location: OuterMembrane, score:9.96.
 
   
 0.874
CKO_00787
Hypothetical protein; COG: COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein.
 
  
 0.831
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.