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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00825Hypothetical protein; COG: NOG14366 non supervised orthologous group. (196 aa)    
Predicted Functional Partners:
CKO_01848
Hypothetical protein; COG: NOG11915 non supervised orthologous group; Psort location: OuterMembrane, score:9.49.
  
     0.750
CKO_00826
Hypothetical protein; COG: COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
       0.703
CKO_00025
Hypothetical protein; KEGG: ecj:JW3654 1.3e-264 yidJ; predicted sulfatase/phosphatase; COG: COG3119 Arylsulfatase A and related enzymes.
 
 
 0.654
CKO_00824
Hypothetical protein; KEGG: shn:Shewana3_3435 7.1e-28 transcriptional regulator, LysR family K06022; COG: COG0583 Transcriptional regulator; Psort location: Cytoplasmic, score:9.97; Belongs to the LysR transcriptional regulatory family.
 
     0.623
CKO_00027
Hypothetical protein; KEGG: bha:BH0394 1.2e-07 adaA; methylphosphotriester-DNA alkyltransferase (AraC/XylS family) K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.516
CKO_00850
Hypothetical protein; KEGG: eca:ECA4254 1.8e-61 putative iron(III) ABC transporter ATP-binding protein K02013; COG: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components; Psort location: Cytoplasmic, score:9.12.
  
     0.499
CKO_04128
Hypothetical protein; KEGG: eci:UTI89_C3136 4.2e-252 hypothetical protein K00803; COG: COG0277 FAD/FMN-containing dehydrogenases; Psort location: Cytoplasmic, score:8.96.
  
     0.478
CKO_03976
Hypothetical protein; COG: COG5276 Uncharacterized conserved protein.
 
     0.475
CKO_00905
Hypothetical protein; COG: COG1629 Outer membrane receptor proteins, mostly Fe transport; Psort location: OuterMembrane, score:10.00.
  
     0.406
CKO_01243
Hypothetical protein; COG: COG1629 Outer membrane receptor proteins, mostly Fe transport; Psort location: OuterMembrane, score:10.00.
  
     0.406
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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