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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_00835Hypothetical protein; KEGG: shn:Shewana3_2312 0.0015 1-(5-phosphoribosyl)-5- K01814; COG: COG1629 Outer membrane receptor proteins, mostly Fe transport; Psort location: OuterMembrane, score:10.00. (695 aa)    
Predicted Functional Partners:
CKO_02575
Hypothetical protein; KEGG: stm:STM0588 0. entF; enterobactin synthetase, component F (nonribosomal peptide synthetase) K02364; COG: COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases; Psort location: CytoplasmicMembrane, score:8.46.
  
  
 0.901
CKO_02566
Hypothetical protein; KEGG: spt:SPA2137 1.4e-143 entB; isochorismatase K01252; COG: COG3433 Aryl carrier domain; Psort location: Cytoplasmic, score:8.96.
  
  
 0.856
CKO_00834
Hypothetical protein; COG: COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
  
  
 0.805
CKO_02385
Hypothetical protein; COG: COG1629 Outer membrane receptor proteins, mostly Fe transport; Psort location: OuterMembrane, score:10.00.
 
  
 0.770
CKO_02848
Hypothetical protein; COG: COG1629 Outer membrane receptor proteins, mostly Fe transport; Psort location: OuterMembrane, score:10.00.
 
  
 0.751
CKO_00833
Hypothetical protein; KEGG: ava:Ava_0005 3.5e-12 probable methyltransferase K00598; COG: NOG36168 non supervised orthologous group.
       0.664
CKO_02057
Hypothetical protein; COG: COG0672 High-affinity Fe2+/Pb2+ permease; Psort location: CytoplasmicMembrane, score:10.00.
   
  
 0.600
CKO_00832
Hypothetical protein; KEGG: tbd:Tbd_2559 0.0074 dsbD; thiol:disulfide interchange protein DsbD K04084; COG: COG0609 ABC-type Fe3+-siderophore transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
  
 0.594
CKO_03832
Hypothetical protein; COG: COG3712 Fe2+-dicitrate sensor, membrane component.
 
  
 0.566
CKO_02654
Hypothetical protein; KEGG: shn:Shewana3_3063 4.6e-07 phosphatidylglycerophosphatase K01094; COG: COG1629 Outer membrane receptor proteins, mostly Fe transport; Psort location: OuterMembrane, score:10.00.
 
  
 0.517
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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